Insertion junction: CLIP2.055434_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055434
Chromosome:chromosome 12
Location:8101349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552600 FKM9 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGCACCACCGCCGTGTGCATCTCGTGCCTTGCCACGCGTTCCCTGT
Internal bar code:GGGCGGGCAACACCTGATTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGTGTGTGTCG
Suggested primer 2:CACGTTTCGTTTCCGTTGCT