Insertion junction: CLIP2.055443_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055443
Chromosome:chromosome 3
Location:6504659
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g193850 SUCLG1,SCLA1,TEF25,SCL1 (1 of 1) K01899 - succinyl-CoA synthetase alpha subunit (LSC1); Succinyl-CoA ligase alpha chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACCAGCTCCAGCTCCGCCTCAACAGCCTCCAGAATGGCCTTGGCCG
Internal bar code:TGCGGGAGTGGAGAGAGATCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGTGCAAGACTCTTGC
Suggested primer 2:AGAGCCCTGGTTGAATTCCG