Insertion junction: CLIP2.055460_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055460
Chromosome:chromosome 2
Location:6814060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388171 (1 of 2) PTHR12905//PTHR12905:SF0 - SPERM PROTEIN HOMOLOG // METALLOPHOSPHOESTERASE DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATCAAGAAGCGCGCAAAAACCGTAGCACCCGAGTGAACCCTGTGCGC
Internal bar code:TGAAGAACATCGGGTTGACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4621
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTTCAAACTCAACCCAC
Suggested primer 2:CGTGCAGCTGCCTTTCAAAT