Insertion junction: CLIP2.055463_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055463
Chromosome:chromosome 2
Location:5067692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111200 (1 of 1) PTHR10641//PTHR10641:SF492 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB-RELATED PROTEIN A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCATGTGATAAAGGCGGAAGCGAATAGCAACATCAGCTGCACCTTGC
Internal bar code:AGCAGTTGGTCGGCGGGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3767
LEAP-Seq percent confirming:82.716
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCATATTACTCCGGCGC
Suggested primer 2:CTCCCCGCCTGATCTTTTGT