Insertion junction: CLIP2.055466_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055466
Chromosome:chromosome 12
Location:9330948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541950 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGACACCGCAGGGGCGTCAAGGATCCGCACCTTCAGCAGCAGGGGCGA
Internal bar code:TAGAGTTGGCCGCGCGTTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1013
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTACTCCATGAGCGCACT
Suggested primer 2:TGATTGCACGTGTACAGGCT