Insertion junction: CLIP2.055470_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055470
Chromosome:chromosome 12
Location:8586026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548650 BBS4 (1 of 1) K16531 - Bardet-Biedl syndrome 4 protein (BBS4); Bardet Biedl syndrome-4 associated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGGGTCAAGGCCCCTGATGCGGAGCTGTGGGCACGACGCTGGCAGCT
Internal bar code:TTTGCGGCAGGCTTGCGATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1040
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACTCCCAAACCCTCCC
Suggested primer 2:CGTTGCAGGCCAAATTGGAA