Insertion junction: CLIP2.055474_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055474
Chromosome:chromosome 1
Location:3543569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023050 UBX2 (1 of 2) IPR006567//IPR018997 - PUG domain // PUB domain; Ubiquitin-associated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGACCACGCGGCGGCCCAGCACCATCTGTCTCTCTCGGGCGCTGCC
Internal bar code:AAAAGAAGAACACGGGTTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1099
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGGGGATGGGGTTTGAG
Suggested primer 2:GAACGAATGCGGAATGGACG