Insertion junction: CLIP2.055477_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055477
Chromosome:chromosome 2
Location:5817297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117150 (1 of 1) PTHR23077:SF10 - PACHYTENE CHECKPOINT PROTEIN 2 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTCAAGTCATCCGCAAGGGACAGGCCCAACGGCGCGCCTAACTCCGC
Internal bar code:TCCCCCTATGGTCGCCGCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1457
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCCAACCTACACACCC
Suggested primer 2:CCTGCTGCAAACACAGACAC