Insertion junction: CLIP2.055477_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055477
Chromosome:chromosome 2
Location:5817298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117150 (1 of 1) PTHR23077:SF10 - PACHYTENE CHECKPOINT PROTEIN 2 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACATCGCTGCTGCCTGCCGCTTGCCGCGGGCCCCTTGCCCGCCGCCG
Internal bar code:TCCCCCTATGGTCGCCGCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTGCAAACACAGACAC
Suggested primer 2:CCTTCCCAACCTACACACCC