Insertion junction: CLIP2.055486_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055486
Chromosome:chromosome 6
Location:2681725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270600 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCTCCTGGCCGTCGCCATAGCCGTAGCCATCAAAAAGTGGTTCCGT
Internal bar code:TCCTGGTATAAAAAACATGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2137
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGGGGTGCCGATCGTAG
Suggested primer 2:GCTCTACCTCCAGCTTCACC