Insertion junction: CLIP2.055490_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055490
Chromosome:chromosome 3
Location:2828616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162050 HDA4 RPD3/HDA1 type histone deacetylase; (1 of 1) PTHR10625//PTHR10625:SF120 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 15 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACAGCCGCCACCGCCCGCCTACCGCCACAGGACCACACACGCCGTAAC
Internal bar code:TCAAGTACGCACTGACCCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2404
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGCTCTTTGCCTTAGC
Suggested primer 2:AAGCTGTCTACTTGCGGCAT