Insertion junction: CLIP2.055492_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055492
Chromosome:chromosome 10
Location:5643669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458900 SRR33 (1 of 39) IPR001190 - SRCR domain; Scavenger receptor cysteine rich (SRCR) protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCAGAAGGGGCAGCAAACCTTGTGGCAGAAGTCGCCACCGCCCAAACA
Internal bar code:GTGGTGGACGGACTTTGTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGTTGCCCATGTATGGT
Suggested primer 2:CACATAATCCGCGTCCCGTA