Insertion junction: CLIP2.055500_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055500
Chromosome:chromosome 7
Location:3700161
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337700 PDC1 5'UTR_intron
Cre07.g337750 EBM5 (1 of 3) PTHR31451//PTHR31451:SF1 - FAMILY NOT NAMED // MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED; Mannan endo-1%252C4-beta-mannosidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGTAATCAGGTGCGCTCCCGGTACGCGCTGCAGACTGGTACTTGGTC
Internal bar code:GATGACATCTGATTCGAGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:309
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAACCCAAAACCTCGAC
Suggested primer 2:GCTGAATTTCATTCGCGCCT