Insertion junction: CLIP2.055501_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055501
Chromosome:chromosome 3
Location:5232060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182000 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGACGCCGTCCGGGTTTAGGCCTGGGGTGTAGGGGCCATGGCAGGGGC
Internal bar code:CCCGGAGAATGAGTTCGTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:6330
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGATTCTTTGCTCGACGTGC
Suggested primer 2:TAGAGCACACACCACGTCAC