Insertion junction: CLIP2.055502_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055502
Chromosome:chromosome 3
Location:7304076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206950 (1 of 1) PF05183 - RNA dependent RNA polymerase (RdRP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCATCTACGTGTGAACCCGCTGCAACGCCCCGACAGGCGGATAACAC
Internal bar code:ACCGAATATCATAGTTTTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5535
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAAATACCCCATTGCGCGAC
Suggested primer 2:GCTGACTGCATCATTCTGCG