Insertion junction: CLIP2.055507_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055507
Chromosome:chromosome 9
Location:3108722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394139 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCGGAACCTGGGCAAGGGCCAGCTGATAGAGAGCTGGAAGAATTTCC
Internal bar code:TCTATCTTTATCAAGACAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:718
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGGCTTCGTTGGAGGG
Suggested primer 2:CACCCCACCTTACATCCCAC