Insertion junction: CLIP2.055509_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055509
Chromosome:chromosome 10
Location:1306250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427200 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCGGGTGACCGAGGTGGTAAGCCCGCACCGGTAGGCTGCGGCCTGTG
Internal bar code:TCAGTCTAGTGTGACCGTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:6343
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAACAAACTTCCTGGCC
Suggested primer 2:GAGGCAATGCGCTAACATGG