Insertion junction: CLIP2.055511_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055511
Chromosome:chromosome 6
Location:5661318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287850 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGCCGCTGAAAGAGGGCGCCGCCCACGGCGCCCGCAGCCCCGGCATG
Internal bar code:ATCGCGTTACCAAGTTCACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2116
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTGTGTGCTGTCGTGTG
Suggested primer 2:GCTCCTCATCTGAGTCGTCG