Insertion junction: CLIP2.055511_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055511
Chromosome:chromosome 6
Location:5661318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287850 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGCGCGGCAGCGGCGGTGGTCAGTGGACATGTCCTGGGCAGGCTCGG
Internal bar code:GCGAGAATGGGCACTAGGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3592
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCTCATCTGAGTCGTCG
Suggested primer 2:CACTTGTGTGCTGTCGTGTG