Insertion junction: CLIP2.055514_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055514
Chromosome:chromosome 1
Location:2441878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014150 MFT5:MAE5,MFT5,MAE5 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGGCGGGGGGCGTGACGGAGCACAAATGAGGTTGTAGGGGTCGGGGC
Internal bar code:TCTGGTTTAGTTTAGGGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1545
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGTATTTTCGCCGTCC
Suggested primer 2:GGCGATCAGACTAGGCAGAC