Insertion junction: CLIP2.055521_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055521
Chromosome:chromosome 1
Location:3108556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019750 (1 of 1) PTHR10871:SF4 - DNA TOPOISOMERASE 6 SUBUNIT B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAGCTGATTCCCAGAACCCAGCAGATGGCAAACAATTTGCAACGGC
Internal bar code:ATGTTAGAGCCCATTTTGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:620
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGCGTGCGTAGTAGTT
Suggested primer 2:CCTCTATGATGCGGGTGTCC