Insertion junction: CLIP2.055533_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055533
Chromosome:chromosome 16
Location:5194853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684800 (1 of 1) PF00240//PF13855 - Ubiquitin family (ubiquitin) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCAGTATGGTCCGAGCAGGTGCCAGCCAAGCTGTTAACCATGGTACA
Internal bar code:CCTGTGGATCTTAAGAATGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1502
LEAP-Seq percent confirming:93.4783
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGTCAACACACACACAC
Suggested primer 2:CAGCTCGCGGATAAAGTTGC