Insertion junction: CLIP2.055534_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055534
Chromosome:chromosome 13
Location:2276155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578550 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain intron
lncRNA_TCONS_00020366 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGTGCATGGATTAAGCCAATAACGGTTAGATGGTTGCGATCGACCG
Internal bar code:CGGTAGGATGTCCCTTGCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2023
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGGGCGCAGATGATCAG
Suggested primer 2:TATCTGAGCTGACTGGGCCT