Insertion junction: CLIP2.055537_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055537
Chromosome:chromosome 2
Location:7169284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACGGCGAGTTTGTCTCCCCCGATGTCTGGACCGACCCAAAGCTCTGC
Internal bar code:GGGCTGGTAATGTATAGACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1948
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTTTGTGCG
Suggested primer 2:CGTATCGGGCAGCAAAATGG