Insertion junction: CLIP2.055537_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055537
Chromosome:chromosome 2
Location:7169284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGTTCCTGTATGTTCAGTGGACAAAAGATAAGTAAACAATGAGATGT
Internal bar code:GGCCAGCCGAAAGCCGTGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3453
LEAP-Seq percent confirming:73.1183
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATCGGGCAGCAAAATGG
Suggested primer 2:TGTGTGTGTGTGTTTGTGCG