Insertion junction: CLIP2.055539_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055539
Chromosome:chromosome 16
Location:566216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692350 (1 of 10) PTHR23257//PTHR23257:SF520 - SERINE-THREONINE PROTEIN KINASE // IP11267P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGAGCTGAGTAAAGGTACAGGACTCGACCCAGCCGCAATGATTAGCC
Internal bar code:GCTTTTTATTCCGAAGTGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTGTGGACTTTCGGGC
Suggested primer 2:CACAGCAACTGCAATCCACC