Insertion junction: CLIP2.055549_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055549
Chromosome:chromosome 1
Location:5227332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036600 EXN3 (1 of 2) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70); Exoribonuclease II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCCCTCACCCGCATCGACACCGCCGCGTCCTCGCGCGAGTCGTGC
Internal bar code:ATTGTAGTTGACCACAACAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2661
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCCCCGTCATTGACACC
Suggested primer 2:ATCAGGAGGCATGTGTGTGG