Insertion junction: CLIP2.055559_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055559
Chromosome:chromosome 9
Location:3215856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394658 LCI28 (1 of 1) 1.1.1.21 - Aldehyde reductase / Polyol dehydrogenase (NADP(+)); Low-CO2-induced aldose reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTAGGAATCCTTTATCAGTCATGACTTGTATGGAGTGGATTACAACT
Internal bar code:ATTCGTATTGAGATACCTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:335
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTGTTTGAAGCCGCACC
Suggested primer 2:ACTCACGATCTGCACACCAG