Insertion junction: CLIP2.055561_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055561
Chromosome:plastome
Location:121904
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802313 rbcL,ChreCp049,2717040 (1 of 1) K01601 - ribulose-bisphosphate carboxylase large chain (rbcL); RuBisCO large subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGACCTAGAGTACCACCACCGAACTGAAGACATGCGTCATCACCGA
Internal bar code:CAAGTTACTGCAAGGGTGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:146
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACCATTCATGCGTTGGC
Suggested primer 2:TATACGTGCGACCCGATGTG