Insertion junction: CLIP2.055563_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055563
Chromosome:chromosome 3
Location:4180665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173300 (1 of 6) IPR007577//IPR029044 - Glycosyltransferase, DXD sugar-binding motif // Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGAAGGTCGCAGCACTGGTGAGAGTACACGCGCAGGGCGGGCGGGTA
Internal bar code:CTTATCCACAGGGGAGGTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2262
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TATCTGCCTCCGTCCCAAGA
Suggested primer 2:AGGCGTGTGCATGTATCACA