Insertion junction: CLIP2.055564_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055564
Chromosome:chromosome 2
Location:3658429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100050 P4H-11,PHX6,PFH11 Prolyl 4-hydroxylase 11; (1 of 2) PTHR10869//PTHR10869:SF79 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCCTCCCGACCAGCCAACGCATGTACACGCACAGTGCGCTTCACGC
Internal bar code:ATTACGGTTACAAGGTCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:60
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGACGTGTGTGATGCCA
Suggested primer 2:CGACACACAGGCACACAAAG