Insertion junction: CLIP2.055566_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055566
Chromosome:chromosome 1
Location:5059579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035250 (1 of 1) PTHR21549:SF0 - COILED-COIL DOMAIN-CONTAINING PROTEIN 112 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGATTGGATTGCCCCCCACACACACACACACACGCTCCGTCCCACT
Internal bar code:TAAACGTAGCCTGATGGCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1953
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTAGTAGCATGGCTGAG
Suggested primer 2:TTGTTGAGAAGGCAAGGGCA