Insertion junction: CLIP2.055568_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055568
Chromosome:chromosome 3
Location:3690691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g168700 PGP1 (1 of 1) PTHR19288:SF33 - PHOSPHOGLYCOLATE PHOSPHATASE 2; Phosphoglycolate phosphatase/4-nitrophenylphosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCCCTTGGCGAGAGTGCAAGTAAAATGTGTACATTTGTTGCGTGTCG
Internal bar code:TCTGAAGAGGGGTTTTGGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:730
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCATACCTGGAGTCCATC
Suggested primer 2:AGGATGTCGGTAGGGTCGAA