Insertion junction: CLIP2.055574_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055574
Chromosome:chromosome 1
Location:5125956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035800 IRK2 (1 of 2) PTHR11767//PTHR11767:SF47 - INWARD RECTIFIER POTASSIUM CHANNEL // SUBFAMILY NOT NAMED; Inwardly-rectifying potassium channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGATCGCAATGCCCCGGTGCCCCGATGCGCCGGCGAGGCGCGTCTCGC
Internal bar code:TGCCAGTTGTGAGGTTGTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGCGCGAAGAACAGGTA
Suggested primer 2:CTCGCTGGCTTTGTTGCTTT