Insertion junction: CLIP2.055579_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055579
Chromosome:chromosome 1
Location:3372486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021850 HEL2 (1 of 2) PTHR24031:SF249 - ATP-DEPENDENT DNA HELICASE RECG; DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCGGGCCGCTTTCAGTCATTCCTGCTGACCCACCTGCTGCACCGCCG
Internal bar code:ACAGCGGGCGGAACGATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCTGGGAGTAGGGTTGC
Suggested primer 2:CACGGGGAGGGGTTACATTC