Insertion junction: CLIP2.055581_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055581
Chromosome:chromosome 11
Location:3279958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476376 FAP221,Pcdp1,RPC82 Flagellar Associated Protein 221; (1 of 1) PTHR23053//PTHR23053:SF21 - DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAAAGCGTAGGGGGAGGTGGGAGGTGGGAAGAAGAGCAGGTGGAGCAG
Internal bar code:CGTTTAGATCCAGTTCAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:432
LEAP-Seq percent confirming:19.5122
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TACTTATGGGGAGGGTGGGG
Suggested primer 2:CACTGCATCACACACACACG