Insertion junction: CLIP2.055597_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055597
Chromosome:chromosome 13
Location:1130794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569500 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTCTCAAGGTTCGGGAAGTCGGCCGCAACCCAGGCGTCGGGGCCCTC
Internal bar code:AGTTCCGGGTTGCGTAACCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3367
LEAP-Seq percent confirming:94.8276
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATGTATGAACGGGCAAG
Suggested primer 2:GGAGCACGAAGAGACAACCA