Insertion junction: CLIP2.055600_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055600
Chromosome:chromosome 17
Location:3951846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728150 YKT6 Endosomal R-SNARE protein, Yky6-family (R.II); (1 of 1) K08516 - synaptobrevin homolog YKT6 (YKT6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGCGCAAGCGCGCCTGCAGGGGCTCATGGCTGCTGCTGCCAGCCCAT
Internal bar code:CGTTAAATGATAAATCGATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2296
LEAP-Seq percent confirming:74.1936
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTACCTGTGTCACGTGCA
Suggested primer 2:CGTGAGCTTTCAAACACGCA