Insertion junction: CLIP2.055617_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055617
Chromosome:chromosome 17
Location:6642804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745747 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCCTTGGCCGACGACACCATCTTGAACGGCTGCACCGTGAAGCGCC
Internal bar code:ATTTAATGCAGGACCCGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2030
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAAACCGCTTGTGTCAT
Suggested primer 2:AGTACAGGTCAGTGTTGGCG