Insertion junction: CLIP2.055619_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055619
Chromosome:chromosome 1
Location:5102956
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g035600 MSC2 Mechanosensitive ion channel; (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCAGCCCACCCTCCCGCGCTCCCGCCACCTCCACAGCCCACCTCTCT
Internal bar code:CGTCCGCTGTTGTATCCACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:504
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCATGTGCGGCTTGTTA
Suggested primer 2:GCAGCAGCTGACCAAAACAA