Insertion junction: CLIP2.055627_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055627
Chromosome:chromosome 17
Location:2738162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717700 (1 of 1) PTHR31833:SF2 - UPF0690 PROTEIN C1ORF52 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGCAGGAGGCGGAGGAGCAGGAGGAGGAAGAGGAGGAGGCCCAAGCT
Internal bar code:CGTAAGACGTTTTGCACACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1169
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGTTCCAGTTCTGCTCG
Suggested primer 2:CTAGCGGTTTTGGCATCTGC