Insertion junction: CLIP2.055630_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055630
Chromosome:chromosome 2
Location:3639956
Confidence (%):63
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041612

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGCTGTTGTACCTGAGGTCAGGTCGAGAGTCCTCCAGCAGATACTT
Internal bar code:GGAATAATTAAGCAATTATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:82
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCCATGCCGAGATAACT
Suggested primer 2:ACCCTAAGCCGTGACGAAAG