Insertion junction: CLIP2.055636_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055636
Chromosome:chromosome 6
Location:3464664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278107 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGTGGCGGCGGCGGAGCGGAGCAGCGCGGCGGCGGCGGCGGCGTCAG
Internal bar code:AGGGCCTAGACATTACAATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1084
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCCTGACAAGAGCGAGG
Suggested primer 2:GAGAATGTGCTCCGAGTGCT