Insertion junction: CLIP2.055637_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055637
Chromosome:chromosome 1
Location:6077047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043000 (1 of 1) PTHR30544//PTHR30544:SF6 - 23S RRNA METHYLTRANSFERASE // RADICAL SAM DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCTGGCGGCCAAGCTCGCCACGGCACGAGGAGGCCCAACATGCACCA
Internal bar code:GGTCGACAAATTGCCATAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1420
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTAGTAATCGCCGAGACA
Suggested primer 2:GCACCATACCCTCATCGGAG