Insertion junction: CLIP2.055648_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055648
Chromosome:chromosome 1
Location:6463217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g045650 ZNJ3 DnaJ-like zinc-finger protein; (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGTTGGGAACTGACGCGTTCAACGTTACTCTGCCGCGTTGCTCTCT
Internal bar code:AACAGGAATAGTATGGTAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:462
LEAP-Seq percent confirming:23.8095
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGATGTAGCCCTTGCCC
Suggested primer 2:AAACCCTGTACTCAGCGAGC