Insertion junction: CLIP2.055649_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055649
Chromosome:chromosome 6
Location:128268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249950 (1 of 3) K00889 - 1-phosphatidylinositol-4-phosphate 5-kinase (PIP5K) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGCACAAGAGACGGGCGAGTGAAAGGCGCGGGGCGACGGCAATGCAG
Internal bar code:ATGCTAAGTACGATATCTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1223
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCACATCACTATGGCGC
Suggested primer 2:CAGTTCCAAGTGCTGTTGCC