Insertion junction: CLIP2.055653_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055653
Chromosome:chromosome 2
Location:1562363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCTGTCCCTGTGCGCCTGTTTTGGCGCAGACCGCGCTGACCTGCCG
Internal bar code:TCAATAGACTTTCGTATCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:277
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACTTGAGTCGTTTGCGC
Suggested primer 2:CATTCCATAGGCGTGCTCCT