Insertion junction: CLIP2.055654_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055654
Chromosome:chromosome 17
Location:1967066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710200 IAD1 Indoleamine 2%252C3-dioxygenase; (1 of 1) 1.13.11.11 - Tryptophan 2,3-dioxygenase / Tryptophanase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGCCAACCCTGGGCTGAGGTGCGCGGGACCCTAGGAACGCCTTGCT
Internal bar code:GTTGGTGGATGCCATGGCACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:471
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCATTTCCCGCAACCAC
Suggested primer 2:CGTAACAGGGCCTTGGGATT