Insertion junction: CLIP2.055655_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055655
Chromosome:chromosome 7
Location:3749542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338200 (1 of 2) K17579 - protein phosphatase 1 regulatory subunit 42 (PPP1R42, LRRC67) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGTACACACCCACACGGGCGGGCTTCGTTTTGCTGTTCTTTAAACAC
Internal bar code:CAGTACGAGCAGTAACACCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:700
LEAP-Seq percent confirming:52.381
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCACATCCTGCCTCCCT
Suggested primer 2:GGATGATGGTGTCGCGGTAT