Insertion junction: CLIP2.055657_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055657
Chromosome:chromosome 7
Location:806518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318209 (1 of 6) PTHR12197//PTHR12197:SF138 - SET AND MYND DOMAIN CONTAINING // SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCATGTATGCGGGTTGGCTTGGCAGAGGTGCCGCCCCAAACCCTGCG
Internal bar code:TGTGCCAGTAGGGCTAGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5439
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTAACTTCAGCTCCCGCA
Suggested primer 2:ACTTGTTTGCTTCTGCGCAG